J3_4WQU_021

3D structure

PDB id

4WQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGAGG*CCUUUAAAGAGUG*CUCAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQU|1|CA|G|1055
4WQU|1|CA|G|1056
4WQU|1|CA|A|1057
4WQU|1|CA|G|1058
4WQU|1|CA|G|1059
*
4WQU|1|CA|C|1079
4WQU|1|CA|C|1080
4WQU|1|CA|U|1081
4WQU|1|CA|U|1082
4WQU|1|CA|U|1083
4WQU|1|CA|A|1084
4WQU|1|CA|A|1085
4WQU|1|CA|A|1086
4WQU|1|CA|G|1087
4WQU|1|CA|A|1088
4WQU|1|CA|G|1089
4WQU|1|CA|U|1090
4WQU|1|CA|G|1091
*
4WQU|1|CA|C|1100
4WQU|1|CA|U|1101
4WQU|1|CA|C|1102
4WQU|1|CA|A|1103
4WQU|1|CA|C|1104

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain C9

50S ribosomal protein L36

Chain CK

50S ribosomal protein L10

Chain CL

50S ribosomal protein L11

Chain CQ

50S ribosomal protein L16

Chain CZ

50S ribosomal protein L25