J3_4WQU_027

3D structure

PDB id

4WQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CCAUAG*CGC*GUCG

Length

13 nucleotides

Bulged bases

4WQU|1|CB|C|109

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQU|1|CB|C|11
4WQU|1|CB|C|12
4WQU|1|CB|A|13
4WQU|1|CB|U|14
4WQU|1|CB|A|15
4WQU|1|CB|G|16
*
4WQU|1|CB|C|68
4WQU|1|CB|G|69
4WQU|1|CB|C|70
*
4WQU|1|CB|G|107
4WQU|1|CB|U|108
4WQU|1|CB|C|109
4WQU|1|CB|G|110

Current chains

Chain CB

5S Ribosomal RNA

Nearby chains

Chain C0

50S ribosomal protein L27

Chain CA

Large subunit ribosomal RNA; LSU rRNA

Chain CS

50S ribosomal protein L18

Chain CZ

50S ribosomal protein L25