J3_4WQU_035

3D structure

PDB id

4WQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGCCG*CGGGAC*GGAG

Length

15 nucleotides

Bulged bases

4WQU|1|DA|A|1183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQU|1|DA|C|1116
4WQU|1|DA|G|1117
4WQU|1|DA|C|1118
4WQU|1|DA|C|1119
4WQU|1|DA|G|1120
*
4WQU|1|DA|C|1153
4WQU|1|DA|G|1154
4WQU|1|DA|G|1155
4WQU|1|DA|G|1156
4WQU|1|DA|A|1157
4WQU|1|DA|C|1158
*
4WQU|1|DA|G|1181
4WQU|1|DA|G|1182
4WQU|1|DA|A|1183
4WQU|1|DA|G|1184

Current chains

Chain DA

16S Ribosomal RNA

Nearby chains

Chain DB

30S ribosomal protein S2

Chain DI

30S ribosomal protein S9

Chain DJ

30S ribosomal protein S10

Chain DN

30S ribosomal protein S14 type Z