J3_4WQU_049

3D structure

PDB id

4WQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GC*GGAAUCUUC*GAGC

Length

15 nucleotides

Bulged bases

4WQU|1|BA|U|368

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQU|1|BA|G|46
4WQU|1|BA|C|47
*
4WQU|1|BA|G|361
4WQU|1|BA|G|362
4WQU|1|BA|A|363
4WQU|1|BA|A|364
4WQU|1|BA|U|365
4WQU|1|BA|C|366
4WQU|1|BA|U|367
4WQU|1|BA|U|368
4WQU|1|BA|C|369
*
4WQU|1|BA|G|392
4WQU|1|BA|A|393
4WQU|1|BA|G|394
4WQU|1|BA|C|395

Current chains

Chain BA

16S Ribosomal RNA

Nearby chains

Chain BL

30S ribosomal protein S12

Chain BP

30S ribosomal protein S16

Chain BX

Dityromycin

Chain BZ

50S ribosomal protein L9,Elongation factor G