J3_4WQU_073
3D structure
- PDB id
- 4WQU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- CGG*CUAG*CG
- Length
- 9 nucleotides
- Bulged bases
- 4WQU|1|DA|A|653
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4WQU_073 not in the Motif Atlas
- Geometric match to J3_4LFB_011
- Geometric discrepancy: 0.1249
- The information below is about J3_4LFB_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_56052.5
- Basepair signature
- cWW-F-cWW-cWW-F
- Number of instances in this motif group
- 5
Unit IDs
4WQU|1|DA|C|586
4WQU|1|DA|G|587
4WQU|1|DA|G|588
*
4WQU|1|DA|C|651
4WQU|1|DA|U|652
4WQU|1|DA|A|653
4WQU|1|DA|G|654
*
4WQU|1|DA|C|754
4WQU|1|DA|G|755
Current chains
- Chain DA
- 16S Ribosomal RNA
Nearby chains
- Chain DH
- 30S ribosomal protein S8
- Chain DL
- 30S ribosomal protein S12
- Chain DO
- 30S ribosomal protein S15
- Chain DQ
- 30S ribosomal protein S17
Coloring options: