J3_4WQU_078

3D structure

PDB id

4WQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CCUUGACAUGCUAG*CUAGCACAGGUG*CCCUUACGG

Length

35 nucleotides

Bulged bases

4WQU|1|DA|U|1049

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQU|1|DA|C|989
4WQU|1|DA|C|990
4WQU|1|DA|U|991
4WQU|1|DA|U|992
4WQU|1|DA|G|993
4WQU|1|DA|A|994
4WQU|1|DA|C|995
4WQU|1|DA|A|996
4WQU|1|DA|U|997
4WQU|1|DA|G|998
4WQU|1|DA|C|999
4WQU|1|DA|U|1000
4WQU|1|DA|A|1001
4WQU|1|DA|G|1001|||A
*
4WQU|1|DA|C|1039
4WQU|1|DA|U|1040
4WQU|1|DA|A|1041
4WQU|1|DA|G|1042
4WQU|1|DA|C|1043
4WQU|1|DA|A|1044
4WQU|1|DA|C|1045
4WQU|1|DA|A|1046
4WQU|1|DA|G|1047
4WQU|1|DA|G|1048
4WQU|1|DA|U|1049
4WQU|1|DA|G|1050
*
4WQU|1|DA|C|1208
4WQU|1|DA|C|1209
4WQU|1|DA|C|1210
4WQU|1|DA|U|1211
4WQU|1|DA|U|1212
4WQU|1|DA|A|1213
4WQU|1|DA|C|1214
4WQU|1|DA|G|1215
4WQU|1|DA|G|1216

Current chains

Chain DA

16S Ribosomal RNA

Nearby chains

Chain DN

30S ribosomal protein S14 type Z

Chain DZ

50S ribosomal protein L9,Elongation factor G