J3_4WRA_022

3D structure

PDB id

4WRA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

GGAAC*GGUGCC*GGAGCC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WRA|1|1G|G|1002
4WRA|1|1G|G|1003
4WRA|1|1G|A|1004
4WRA|1|1G|A|1005
4WRA|1|1G|C|1006
*
4WRA|1|1G|G|1023
4WRA|1|1G|G|1024
4WRA|1|1G|U|1025
4WRA|1|1G|G|1026
4WRA|1|1G|C|1027
4WRA|1|1G|C|1028
*
4WRA|1|1G|G|1033
4WRA|1|1G|G|1034
4WRA|1|1G|A|1035
4WRA|1|1G|G|1036
4WRA|1|1G|C|1037
4WRA|1|1G|C|1038

Current chains

Chain 1G

16S ribosomal RNA

Nearby chains

Chain 22

30S ribosomal protein S3