J3_4WRA_060

3D structure

PDB id

4WRA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

GUG*UGUUG*CGCAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WRA|1|1G|G|1072
4WRA|1|1G|U|1073
4WRA|1|1G|G|1074
*
4WRA|1|1G|U|1083
4WRA|1|1G|G|1084
4WRA|1|1G|U|1085
4WRA|1|1G|U|1086
4WRA|1|1G|G|1087
*
4WRA|1|1G|C|1098
4WRA|1|1G|G|1099
4WRA|1|1G|C|1100
4WRA|1|1G|A|1101
4WRA|1|1G|A|1102
4WRA|1|1G|C|1103

Current chains

Chain 1G

16S ribosomal RNA

Nearby chains

Chain 12

30S ribosomal protein S2

Chain 42

30S ribosomal protein S5