J3_4WRO_037
3D structure
- PDB id
- 4WRO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- CGGCC*GGCUAGA*UGACG
- Length
- 17 nucleotides
- Bulged bases
- 4WRO|1|13|A|653||||P_1
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4WRO_037 not in the Motif Atlas
- Homologous match to J3_6CZR_060
- Geometric discrepancy: 0.1568
- The information below is about J3_6CZR_060
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_72319.1
- Basepair signature
- cWW-F-F-F-F-tWH-F-F-cWW-cWW-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
4WRO|1|13|C|586||||P_1
4WRO|1|13|G|587||||P_1
4WRO|1|13|G|588||||P_1
4WRO|1|13|C|589||||P_1
4WRO|1|13|C|590||||P_1
*
4WRO|1|13|G|649||||P_1
4WRO|1|13|G|650||||P_1
4WRO|1|13|C|651||||P_1
4WRO|1|13|U|652||||P_1
4WRO|1|13|A|653||||P_1
4WRO|1|13|G|654||||P_1
4WRO|1|13|A|655||||P_1
*
4WRO|1|13|U|751||||P_1
4WRO|1|13|G|752||||P_1
4WRO|1|13|A|753||||P_1
4WRO|1|13|C|754||||P_1
4WRO|1|13|G|755||||P_1
Current chains
- Chain 13
- 16S ribosomal RNA
Nearby chains
- Chain 3I
- 30S ribosomal protein S12
- Chain 6I
- 30S ribosomal protein S15
- Chain 7E
- 30S ribosomal protein S8
- Chain 8I
- 30S ribosomal protein S17
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