J3_4WSM_002

3D structure

PDB id

4WSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sites

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CAAGC*GCUAGUAA*UGAAUACG

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WSM|1|13|C|936
4WSM|1|13|A|937
4WSM|1|13|A|938
4WSM|1|13|G|939
4WSM|1|13|C|940
*
4WSM|1|13|G|1343
4WSM|1|13|C|1344
4WSM|1|13|U|1345
4WSM|1|13|A|1346
4WSM|1|13|G|1347
4WSM|1|13|U|1348
4WSM|1|13|A|1349
4WSM|1|13|A|1350
*
4WSM|1|13|U|1372
4WSM|1|13|G|1373
4WSM|1|13|A|1374
4WSM|1|13|A|1375
4WSM|1|13|U|1376
4WSM|1|13|A|1377
4WSM|1|13|C|1378
4WSM|1|13|G|1379

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain 3K

Transfer RNA; tRNA

Chain 6E

30S ribosomal protein S7

Chain 8E

30S ribosomal protein S9