J3_4WT1_058

3D structure

PDB id

4WT1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

CUUGACAUGC*GCACAGGUG*CCCUUACG

Length

27 nucleotides

Bulged bases

4WT1|1|1G|U|1049

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WT1|1|1G|C|990
4WT1|1|1G|U|991
4WT1|1|1G|U|992
4WT1|1|1G|G|993
4WT1|1|1G|A|994
4WT1|1|1G|C|995
4WT1|1|1G|A|996
4WT1|1|1G|U|997
4WT1|1|1G|G|998
4WT1|1|1G|C|998|||A
*
4WT1|1|1G|G|1042
4WT1|1|1G|C|1043
4WT1|1|1G|A|1044
4WT1|1|1G|C|1045
4WT1|1|1G|A|1046
4WT1|1|1G|G|1047
4WT1|1|1G|G|1048
4WT1|1|1G|U|1049
4WT1|1|1G|G|1050
*
4WT1|1|1G|C|1208
4WT1|1|1G|C|1209
4WT1|1|1G|C|1210
4WT1|1|1G|U|1211
4WT1|1|1G|U|1212
4WT1|1|1G|A|1213
4WT1|1|1G|C|1214
4WT1|1|1G|G|1215

Current chains

Chain 1G

16S ribosomal RNA

Nearby chains

Chain 22

30S ribosomal protein S3

Chain 5A

30S ribosomal protein S14 type Z