J3_4WZD_032
3D structure
- PDB id
- 4WZD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with cognate tRNA-Tyr in the P-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CUC*GAG*UAGAAG
- Length
- 12 nucleotides
- Bulged bases
- 4WZD|1|1H|G|2334||||P_1
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4WZD_032 not in the Motif Atlas
- Homologous match to J3_9DFE_016
- Geometric discrepancy: 0.0933
- The information below is about J3_9DFE_016
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_61124.2
- Basepair signature
- cWW-tWH-tWW-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
4WZD|1|1H|C|2295||||P_1
4WZD|1|1H|U|2296||||P_1
4WZD|1|1H|C|2297||||P_1
*
4WZD|1|1H|G|2321||||P_1
4WZD|1|1H|A|2322||||P_1
4WZD|1|1H|G|2323||||P_1
*
4WZD|1|1H|U|2332||||P_1
4WZD|1|1H|A|2333||||P_1
4WZD|1|1H|G|2334||||P_1
4WZD|1|1H|A|2335||||P_1
4WZD|1|1H|A|2336||||P_1
4WZD|1|1H|G|2337||||P_1
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 16
- 5S ribosomal RNA; 5S rRNA
- Chain 2K
- Transfer RNA; tRNA
- Chain 41
- 50S ribosomal protein L5
- Chain A8
- 50S ribosomal protein L18
- Chain I8
- 50S ribosomal protein L27
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