J3_4WZD_065
3D structure
- PDB id
- 4WZD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with cognate tRNA-Tyr in the P-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- AC*GAUAAGC*GAUGU
- Length
- 14 nucleotides
- Bulged bases
- 4WZD|1|1H|U|72||||P_1, 4WZD|1|1H|A|74||||P_1
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4WZD_065 not in the Motif Atlas
- Homologous match to J3_9DFE_004
- Geometric discrepancy: 0.1156
- The information below is about J3_9DFE_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_35667.2
- Basepair signature
- cWW-cWW-F-F-F-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
4WZD|1|1H|A|56||||P_1
4WZD|1|1H|C|57||||P_1
*
4WZD|1|1H|G|70||||P_1
4WZD|1|1H|A|71||||P_1
4WZD|1|1H|U|72||||P_1
4WZD|1|1H|A|73||||P_1
4WZD|1|1H|A|74||||P_1
4WZD|1|1H|G|75||||P_1
4WZD|1|1H|C|76||||P_1
*
4WZD|1|1H|G|110||||P_1
4WZD|1|1H|A|111||||P_1
4WZD|1|1H|U|112||||P_1
4WZD|1|1H|G|113||||P_1
4WZD|1|1H|U|114||||P_1
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain F8
- 50S ribosomal protein L23
- Chain K8
- 50S ribosomal protein L29
- Chain P8
- 50S ribosomal protein L34
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