J3_4WZO_044

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

AC*GAUAAGC*GAUGU

Length

14 nucleotides

Bulged bases

4WZO|1|14|U|72, 4WZO|1|14|A|74

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4WZO_044 not in the Motif Atlas

Homologous match to J3_9DFE_004

Geometric discrepancy: 0.139

The information below is about J3_9DFE_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_35667.2

Basepair signature

cWW-cWW-F-F-F-cWW-F-cWW

Number of instances in this motif group

7

Unit IDs

4WZO|1|14|A|56
4WZO|1|14|C|57
*
4WZO|1|14|G|70
4WZO|1|14|A|71
4WZO|1|14|U|72
4WZO|1|14|A|73
4WZO|1|14|A|74
4WZO|1|14|G|75
4WZO|1|14|C|76
*
4WZO|1|14|G|110
4WZO|1|14|A|111
4WZO|1|14|U|112
4WZO|1|14|G|113
4WZO|1|14|U|114

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain B5

50S ribosomal protein L23

Chain G5

50S ribosomal protein L29

Chain L5

50S ribosomal protein L34