J3_4YBB_040
3D structure
- PDB id
- 4YBB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution structure of the Escherichia coli ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.1 Å
Loop
- Sequence
- UAGAAU*GGAAUACCGGUGG*CGG
- Length
- 22 nucleotides
- Bulged bases
- 4YBB|1|AA|U|723
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4YBB|1|AA|U|672
4YBB|1|AA|A|673
4YBB|1|AA|G|674
4YBB|1|AA|A|675
4YBB|1|AA|A|676
4YBB|1|AA|U|677
*
4YBB|1|AA|G|713
4YBB|1|AA|G|714
4YBB|1|AA|A|715
4YBB|1|AA|A|716
4YBB|1|AA|U|717
4YBB|1|AA|A|718
4YBB|1|AA|C|719
4YBB|1|AA|C|720
4YBB|1|AA|G|721
4YBB|1|AA|G|722
4YBB|1|AA|U|723
4YBB|1|AA|G|724
4YBB|1|AA|G|725
*
4YBB|1|AA|C|732
4YBB|1|AA|G|733
4YBB|1|AA|G|734
Current chains
- Chain AA
- 16S rRNA
Nearby chains
- Chain AF
- 30S ribosomal protein S6
- Chain AK
- 30S ribosomal protein S11
- Chain AO
- 30S ribosomal protein S15
- Chain AR
- 30S ribosomal protein S18
- Chain AU
- 30S ribosomal protein S21
- Chain DC
- 50S ribosomal protein L2
Coloring options: