J3_4YZV_018

3D structure

PDB id

4YZV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CAC*GGUAAG*CGAGG

Length

14 nucleotides

Bulged bases

4YZV|1|RA|A|2790

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4YZV|1|RA|C|2789
4YZV|1|RA|A|2790
4YZV|1|RA|C|2791
*
4YZV|1|RA|G|2805
4YZV|1|RA|G|2807
4YZV|1|RA|U|2808
4YZV|1|RA|A|2809
4YZV|1|RA|A|2810
4YZV|1|RA|G|2811
*
4YZV|1|RA|C|2889
4YZV|1|RA|G|2891
4YZV|1|RA|A|2892
4YZV|1|RA|G|2893
4YZV|1|RA|G|2894

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RE

50S ribosomal protein L3

Chain RW

50S ribosomal protein L22