J3_4YZV_078

3D structure

PDB id

4YZV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GAAC*GGUGC*GAGC

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4YZV|1|XA|G|1003
4YZV|1|XA|A|1004
4YZV|1|XA|A|1005
4YZV|1|XA|C|1006
*
4YZV|1|XA|G|1023
4YZV|1|XA|G|1024
4YZV|1|XA|U|1025
4YZV|1|XA|G|1026
4YZV|1|XA|C|1027
*
4YZV|1|XA|G|1034
4YZV|1|XA|A|1035
4YZV|1|XA|G|1036
4YZV|1|XA|C|1037

Current chains

Chain XA

16S rRNA

Nearby chains