J3_4Z3S_002

3D structure

PDB id

4Z3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

CAG*CGAAC*GAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4Z3S_002 not in the Motif Atlas

Homologous match to J3_7RQB_005

Geometric discrepancy: 0.0415

The information below is about J3_7RQB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_44724.4

Basepair signature

cWW-tSH-F-cWW-tHS-cWW-F

Number of instances in this motif group

6

Unit IDs

4Z3S|1|1A|C|698
4Z3S|1|1A|A|699
4Z3S|1|1A|G|700
*
4Z3S|1|1A|C|732
4Z3S|1|1A|G|733
4Z3S|1|1A|A|734
4Z3S|1|1A|A|735
4Z3S|1|1A|C|736
*
4Z3S|1|1A|G|760
4Z3S|1|1A|A|761
4Z3S|1|1A|U|762
4Z3S|1|1A|G|763

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 1D

50S ribosomal protein L2