J3_4Z8C_018

3D structure

PDB id

4Z8C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGA*UUUAAAGAGUG*CUCAC

Length

19 nucleotides

Bulged bases

4Z8C|1|2A|A|1133

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4Z8C|1|2A|G|1100
4Z8C|1|2A|G|1101
4Z8C|1|2A|A|1102
*
4Z8C|1|2A|U|1126
4Z8C|1|2A|U|1127
4Z8C|1|2A|U|1128
4Z8C|1|2A|A|1129
4Z8C|1|2A|A|1130
4Z8C|1|2A|A|1131
4Z8C|1|2A|G|1132
4Z8C|1|2A|A|1133
4Z8C|1|2A|G|1134
4Z8C|1|2A|U|1135
4Z8C|1|2A|G|1136
*
4Z8C|1|2A|C|1145
4Z8C|1|2A|U|1146
4Z8C|1|2A|C|1147
4Z8C|1|2A|A|1148
4Z8C|1|2A|C|1149

Current chains

Chain 2A

23S ribosomal RNA

Nearby chains

Chain 29

50S ribosomal protein L36

Chain 2Q

50S ribosomal protein L16