J3_5AA0_032
3D structure
- PDB id
- 5AA0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of Thermous thermophilus ribosome (A-and P-site tRNA) bound to BipA-GDPCP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- GUCAGC*GCGCAACCCC*GGGACGAC
- Length
- 24 nucleotides
- Bulged bases
- 5AA0|1|BA|C|1066||||P_1, 5AA0|1|BA|G|1190||||P_1
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5AA0|1|BA|G|1064||||P_1
5AA0|1|BA|U|1065||||P_1
5AA0|1|BA|C|1066||||P_1
5AA0|1|BA|A|1067||||P_1
5AA0|1|BA|G|1068||||P_1
5AA0|1|BA|C|1069||||P_1
*
5AA0|1|BA|G|1106||||P_1
5AA0|1|BA|C|1107||||P_1
5AA0|1|BA|G|1108||||P_1
5AA0|1|BA|C|1109||||P_1
5AA0|1|BA|A|1110||||P_1
5AA0|1|BA|A|1111||||P_1
5AA0|1|BA|C|1112||||P_1
5AA0|1|BA|C|1113||||P_1
5AA0|1|BA|C|1114||||P_1
5AA0|1|BA|C|1115||||P_1
*
5AA0|1|BA|G|1185||||P_1
5AA0|1|BA|G|1186||||P_1
5AA0|1|BA|G|1187||||P_1
5AA0|1|BA|A|1188||||P_1
5AA0|1|BA|C|1189||||P_1
5AA0|1|BA|G|1190||||P_1
5AA0|1|BA|A|1191||||P_1
5AA0|1|BA|C|1192||||P_1
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain BF
- 30S ribosomal protein S2
- Chain BG
- 30S ribosomal protein S3
- Chain BI
- 30S ribosomal protein S5
- Chain BM
- 30S ribosomal protein S9
- Chain BN
- 30S ribosomal protein S10
- Chain BR
- 30S ribosomal protein S14 type Z
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