J3_5ADY_011
3D structure
- PDB id
- 5ADY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with HflX
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- GUGGAUGC*GCGAAAAGAAC*GAGUGAAAAAGAACCUGAAAC
- Length
- 40 nucleotides
- Bulged bases
- 5ADY|1|B|A|504, 5ADY|1|B|A|508
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5ADY|1|B|G|24
5ADY|1|B|U|25
5ADY|1|B|G|26
5ADY|1|B|G|27
5ADY|1|B|A|28
5ADY|1|B|U|29
5ADY|1|B|G|30
5ADY|1|B|C|31
*
5ADY|1|B|G|474
5ADY|1|B|C|475
5ADY|1|B|G|476
5ADY|1|B|A|477
5ADY|1|B|A|478
5ADY|1|B|A|479
5ADY|1|B|A|480
5ADY|1|B|G|481
5ADY|1|B|A|482
5ADY|1|B|A|483
5ADY|1|B|C|484
*
5ADY|1|B|G|496
5ADY|1|B|A|497
5ADY|1|B|G|498
5ADY|1|B|U|499
5ADY|1|B|G|500
5ADY|1|B|A|501
5ADY|1|B|A|502
5ADY|1|B|A|503
5ADY|1|B|A|504
5ADY|1|B|A|505
5ADY|1|B|G|506
5ADY|1|B|A|507
5ADY|1|B|A|508
5ADY|1|B|C|509
5ADY|1|B|C|510
5ADY|1|B|U|511
5ADY|1|B|G|512
5ADY|1|B|A|513
5ADY|1|B|A|514
5ADY|1|B|A|515
5ADY|1|B|C|516
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain 0
- 50S RIBOSOMAL PROTEIN L32
- Chain Q
- 50S RIBOSOMAL PROTEIN L20
- Chain S
- 50S RIBOSOMAL PROTEIN L22
- Chain U
- 50S RIBOSOMAL PROTEIN L24
Coloring options: