J3_5ADY_013
3D structure
- PDB id
- 5ADY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with HflX
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- GGUGAUCUA*UGGGG*CAAUCAAACC
- Length
- 24 nucleotides
- Bulged bases
- 5ADY|1|B|U|686, 5ADY|1|B|G|776, 5ADY|1|B|A|789, 5ADY|1|B|U|790, 5ADY|1|B|A|792, 5ADY|1|B|A|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5ADY|1|B|G|681
5ADY|1|B|G|682
5ADY|1|B|U|683
5ADY|1|B|G|684
5ADY|1|B|A|685
5ADY|1|B|U|686
5ADY|1|B|C|687
5ADY|1|B|U|688
5ADY|1|B|A|689
*
5ADY|1|B|U|773
5ADY|1|B|G|774
5ADY|1|B|G|775
5ADY|1|B|G|776
5ADY|1|B|G|777
*
5ADY|1|B|C|787
5ADY|1|B|A|788
5ADY|1|B|A|789
5ADY|1|B|U|790
5ADY|1|B|C|791
5ADY|1|B|A|792
5ADY|1|B|A|793
5ADY|1|B|A|794
5ADY|1|B|C|795
5ADY|1|B|C|796
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain 2
- 50S RIBOSOMAL PROTEIN L34
- Chain C
- 50S RIBOSOMAL PROTEIN L2
- Chain E
- 50S RIBOSOMAL PROTEIN L4
Coloring options: