J3_5ADY_014

3D structure

PDB id

5ADY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with HflX

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

GGAU*AUUUAAAG*CAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ADY|1|B|G|1055
5ADY|1|B|G|1056
5ADY|1|B|A|1057
5ADY|1|B|U|1058
*
5ADY|1|B|A|1080
5ADY|1|B|U|1081
5ADY|1|B|U|1082
5ADY|1|B|U|1083
5ADY|1|B|A|1084
5ADY|1|B|A|1085
5ADY|1|B|A|1086
5ADY|1|B|G|1087
*
5ADY|1|B|C|1102
5ADY|1|B|A|1103
5ADY|1|B|C|1104

Current chains

Chain B

23S RRNA

Nearby chains

Chain 4

50S RIBOSOMAL PROTEIN L36

Chain 7

50S RIBOSOMAL PROTEIN L10

Chain I

50S RIBOSOMAL PROTEIN L11