J3_5AJ3_004
3D structure
- PDB id
- 5AJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the small subunit of the mammalian mitoribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UAUAAUC*GAUAGACCUUAC*GAAA
- Length
- 23 nucleotides
- Bulged bases
- 5AJ3|1|A|U|580, 5AJ3|1|A|A|581, 5AJ3|1|A|A|583
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5AJ3|1|A|U|561
5AJ3|1|A|A|562
5AJ3|1|A|U|563
5AJ3|1|A|A|564
5AJ3|1|A|A|565
5AJ3|1|A|U|566
5AJ3|1|A|C|567
*
5AJ3|1|A|G|578
5AJ3|1|A|A|579
5AJ3|1|A|U|580
5AJ3|1|A|A|581
5AJ3|1|A|G|582
5AJ3|1|A|A|583
5AJ3|1|A|C|584
5AJ3|1|A|C|585
5AJ3|1|A|U|586
5AJ3|1|A|U|587
5AJ3|1|A|A|588
5AJ3|1|A|C|589
*
5AJ3|1|A|G|706
5AJ3|1|A|A|707
5AJ3|1|A|A|708
5AJ3|1|A|A|709
Current chains
- Chain A
- MITORIBOSOMAL 12S RRNA
Nearby chains
- Chain J
- MITORIBOSOMAL PROTEIN US10M, MRPS10
- Chain N
- MITORIBOSOMAL PROTEIN US14M, MRPS14
- Chain Y
- P-SITE AND A-SITE TRNA
Coloring options: