J3_5AJ3_005
3D structure
- PDB id
- 5AJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the small subunit of the mammalian mitoribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUUG*CAG*CUUAUG
- Length
- 13 nucleotides
- Bulged bases
- 5AJ3|1|A|U|697
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5AJ3_005 not in the Motif Atlas
- Homologous match to J3_5J7L_007
- Geometric discrepancy: 0.1555
- The information below is about J3_5J7L_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_82572.1
- Basepair signature
- cWW-tSH-tWW-F-cWW-tHW-F-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
5AJ3|1|A|C|595
5AJ3|1|A|U|596
5AJ3|1|A|U|597
5AJ3|1|A|G|598
*
5AJ3|1|A|C|605
5AJ3|1|A|A|606
5AJ3|1|A|G|607
*
5AJ3|1|A|C|695
5AJ3|1|A|U|696
5AJ3|1|A|U|697
5AJ3|1|A|A|698
5AJ3|1|A|U|699
5AJ3|1|A|G|700
Current chains
- Chain A
- MITORIBOSOMAL 12S RRNA
Nearby chains
- Chain E
- MITORIBOSOMAL PROTEIN US5M, MRPS5
- Chain N
- MITORIBOSOMAL PROTEIN US14M, MRPS14
- Chain i
- MITORIBOSOMAL PROTEIN MS33, MRPS33
Coloring options: