J3_5AJ3_008

3D structure

PDB id

5AJ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the small subunit of the mammalian mitoribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UU*AAUAACC*GA

Length

11 nucleotides

Bulged bases

5AJ3|1|A|C|372

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AJ3|1|A|U|326
5AJ3|1|A|U|327
*
5AJ3|1|A|A|367
5AJ3|1|A|A|368
5AJ3|1|A|U|369
5AJ3|1|A|A|370
5AJ3|1|A|A|371
5AJ3|1|A|C|372
5AJ3|1|A|C|373
*
5AJ3|1|A|G|383
5AJ3|1|A|A|384

Current chains

Chain A

MITORIBOSOMAL 12S RRNA

Nearby chains

Chain F

MITORIBOSOMAL PROTEIN BS6M, MRPS6

Chain K

MITORIBOSOMAL PROTEIN US11M, MRPS11

Chain R

MITORIBOSOMAL PROTEIN BS18M, MRPS18C

Chain U

MITORIBOSOMAL PROTEIN BS21M, MRPS21

Chain m

MITORIBOSOMAL PROTEIN MS37, MRPS37