J3_5AJ4_010

3D structure

PDB id

5AJ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 55S mammalian mitoribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CACGCUUA*UAACC*GAG

Length

16 nucleotides

Bulged bases

5AJ4|1|BA|A|755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AJ4|1|BA|C|667
5AJ4|1|BA|A|668
5AJ4|1|BA|C|669
5AJ4|1|BA|G|670
5AJ4|1|BA|C|671
5AJ4|1|BA|U|672
5AJ4|1|BA|U|673
5AJ4|1|BA|A|674
*
5AJ4|1|BA|U|753
5AJ4|1|BA|A|754
5AJ4|1|BA|A|755
5AJ4|1|BA|C|756
5AJ4|1|BA|C|757
*
5AJ4|1|BA|G|766
5AJ4|1|BA|A|767
5AJ4|1|BA|G|768

Current chains

Chain BA

MITORIBOSOMAL 16S Ribosomal RNA

Nearby chains

Chain B7

MITORIBOSOMAL PROTEIN BL34M, MRPL34

Chain BX

MITORIBOSOMAL PROTEIN UL23M, MRPL23

Chain Be

MITORIBOSOMAL PROTEIN ML41, MRPL41

Chain Bw

MITORIBOSOMAL PROTEIN ML65, MRPS30