J3_5CZP_007
3D structure
- PDB id
- 5CZP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex containing E. coli RF2
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUUAC*GGCGA
- Length
- 25 nucleotides
- Bulged bases
- 5CZP|1|QA|A|975, 5CZP|1|QA|G|976, 5CZP|1|QA|A|978
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5CZP_007 not in the Motif Atlas
- Homologous match to J3_4LFB_004
- Geometric discrepancy: 0.0511
- The information below is about J3_4LFB_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_88451.1
- Basepair signature
- cWW-tWW-F-F-F-F-F-tSS-cWW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
5CZP|1|QA|U|955
5CZP|1|QA|U|956
5CZP|1|QA|U|957
5CZP|1|QA|A|958
5CZP|1|QA|A|959
5CZP|1|QA|U|960
5CZP|1|QA|U|961
5CZP|1|QA|C|962
*
5CZP|1|QA|G|973
5CZP|1|QA|A|974
5CZP|1|QA|A|975
5CZP|1|QA|G|976
5CZP|1|QA|A|977
5CZP|1|QA|A|978
5CZP|1|QA|C|979
5CZP|1|QA|C|980
5CZP|1|QA|U|981
5CZP|1|QA|U|982
5CZP|1|QA|A|983
5CZP|1|QA|C|984
*
5CZP|1|QA|G|1221
5CZP|1|QA|G|1222
5CZP|1|QA|C|1223
5CZP|1|QA|G|1224
5CZP|1|QA|A|1225
Current chains
- Chain QA
- 16S rRNA
Nearby chains
- Chain QJ
- 30S ribosomal protein S10
- Chain QM
- 30S ribosomal protein S13
- Chain QN
- 30S ribosomal protein S14 type Z
- Chain QS
- 30S ribosomal protein S19
- Chain QY
- Peptide chain release factor 2
Coloring options: