J3_5CZP_016
3D structure
- PDB id
- 5CZP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex containing E. coli RF2
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- UAAAC*GGGUCGUG*CG
- Length
- 15 nucleotides
- Bulged bases
- 5CZP|1|RA|U|273|||B
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5CZP_016 not in the Motif Atlas
- Homologous match to J3_7RQB_003
- Geometric discrepancy: 0.0655
- The information below is about J3_7RQB_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_97921.1
- Basepair signature
- cWW-F-F-tSH-tWH-F-cWW-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
5CZP|1|RA|U|269
5CZP|1|RA|A|270
5CZP|1|RA|A|271
5CZP|1|RA|A|272|||A
5CZP|1|RA|C|272|||B
*
5CZP|1|RA|G|272|||V
5CZP|1|RA|G|272|||W
5CZP|1|RA|G|272|||X
5CZP|1|RA|U|272|||Y
5CZP|1|RA|C|272|||Z
5CZP|1|RA|G|273|||A
5CZP|1|RA|U|273|||B
5CZP|1|RA|G|273|||C
*
5CZP|1|RA|C|366
5CZP|1|RA|G|370
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R1
- 50S ribosomal protein L28
- Chain RI
- 50S ribosomal protein L9
Coloring options: