J3_5DFE_019

3D structure

PDB id

5DFE (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex containing E. coli RF2

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGA*UUUAAAG*CAC

Length

13 nucleotides

Bulged bases

5DFE|1|RA|U|1083

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5DFE|1|RA|G|1055
5DFE|1|RA|G|1056
5DFE|1|RA|A|1057
*
5DFE|1|RA|U|1081
5DFE|1|RA|U|1082
5DFE|1|RA|U|1083
5DFE|1|RA|A|1084
5DFE|1|RA|A|1085
5DFE|1|RA|A|1086
5DFE|1|RA|G|1087
*
5DFE|1|RA|C|1102
5DFE|1|RA|A|1103
5DFE|1|RA|C|1104

Current chains

Chain RA

T23S rRNA

Nearby chains

Chain R9

50S ribosomal protein L36