J3_5DFE_054

3D structure

PDB id

5DFE (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex containing E. coli RF2

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CG*CGGUAAG*CGAGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5DFE|1|YA|C|2789
5DFE|1|YA|G|2792
*
5DFE|1|YA|C|2804
5DFE|1|YA|G|2805
5DFE|1|YA|G|2807
5DFE|1|YA|U|2808
5DFE|1|YA|A|2809
5DFE|1|YA|A|2810
5DFE|1|YA|G|2811
*
5DFE|1|YA|C|2889
5DFE|1|YA|G|2891
5DFE|1|YA|A|2892
5DFE|1|YA|G|2893
5DFE|1|YA|G|2894

Current chains

Chain YA

T23S rRNA

Nearby chains

Chain YE

50S ribosomal protein L3