J3_5DOY_003
3D structure
- PDB id
- 5DOY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- GGAG*CUUUAAAG*CAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5DOY|1|1A|G|1055
5DOY|1|1A|G|1056
5DOY|1|1A|A|1057
5DOY|1|1A|G|1058
*
5DOY|1|1A|C|1080
5DOY|1|1A|U|1081
5DOY|1|1A|U|1082
5DOY|1|1A|U|1083
5DOY|1|1A|A|1084
5DOY|1|1A|A|1085
5DOY|1|1A|A|1086
5DOY|1|1A|G|1087
*
5DOY|1|1A|C|1102
5DOY|1|1A|A|1103
5DOY|1|1A|C|1104
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 19
- 50S Ribosomal Protein L36
Coloring options: