J3_5E7K_059

3D structure

PDB id

5E7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CCUUGACAUGC*GCACAG*CUUACGG

Length

24 nucleotides

Bulged bases

5E7K|1|1G|U|1212, 5E7K|1|1G|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5E7K|1|1G|C|989
5E7K|1|1G|C|990
5E7K|1|1G|U|991
5E7K|1|1G|U|992
5E7K|1|1G|G|993
5E7K|1|1G|A|994
5E7K|1|1G|C|995
5E7K|1|1G|A|996
5E7K|1|1G|U|997
5E7K|1|1G|G|998
5E7K|1|1G|C|998|||A
*
5E7K|1|1G|G|1042
5E7K|1|1G|C|1043
5E7K|1|1G|A|1044
5E7K|1|1G|C|1045
5E7K|1|1G|A|1046
5E7K|1|1G|G|1047
*
5E7K|1|1G|C|1210
5E7K|1|1G|U|1211
5E7K|1|1G|U|1212
5E7K|1|1G|A|1213
5E7K|1|1G|C|1214
5E7K|1|1G|G|1215
5E7K|1|1G|G|1216

Current chains

Chain 1G

16S rRNA

Nearby chains

Chain 5A

30S ribosomal protein S14 type Z