J3_5E81_056

3D structure

PDB id

5E81 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

CUUGACAUGC*GCACAG*CUUACG

Length

22 nucleotides

Bulged bases

5E81|1|1G|U|1212, 5E81|1|1G|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5E81|1|1G|C|990
5E81|1|1G|U|991
5E81|1|1G|U|992
5E81|1|1G|G|993
5E81|1|1G|A|994
5E81|1|1G|C|995
5E81|1|1G|A|996
5E81|1|1G|U|997
5E81|1|1G|G|998
5E81|1|1G|C|998|||A
*
5E81|1|1G|G|1042
5E81|1|1G|C|1043
5E81|1|1G|A|1044
5E81|1|1G|C|1045
5E81|1|1G|A|1046
5E81|1|1G|G|1047
*
5E81|1|1G|C|1210
5E81|1|1G|U|1211
5E81|1|1G|U|1212
5E81|1|1G|A|1213
5E81|1|1G|C|1214
5E81|1|1G|G|1215

Current chains

Chain 1G

16S ribosomal RNA

Nearby chains

Chain 5A

30S ribosomal protein S14 type Z