J3_5EL4_006

3D structure

PDB id

5EL4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

GAAC*GGUGCC*GGAGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5EL4|1|13|G|1003
5EL4|1|13|A|1004
5EL4|1|13|A|1005
5EL4|1|13|C|1006
*
5EL4|1|13|G|1023
5EL4|1|13|G|1024
5EL4|1|13|U|1025
5EL4|1|13|G|1026
5EL4|1|13|C|1027
5EL4|1|13|C|1028
*
5EL4|1|13|G|1033
5EL4|1|13|G|1034
5EL4|1|13|A|1035
5EL4|1|13|G|1036
5EL4|1|13|C|1037

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain 14

Large subunit ribosomal RNA; LSU rRNA