3D structure

PDB id
5EL4 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position
Experimental method
X-RAY DIFFRACTION
Resolution
3.15 Å

Loop

Sequence
CGUCGUCAG*CGCAACCC*GGACGACGUCUG
Length
29 nucleotides
Bulged bases
5EL4|1|1G|U|1196
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5EL4|1|1G|C|1060
5EL4|1|1G|G|1061
5EL4|1|1G|U|1062
5EL4|1|1G|C|1063
5EL4|1|1G|G|1064
5EL4|1|1G|U|1065
5EL4|1|1G|C|1066
5EL4|1|1G|A|1067
5EL4|1|1G|G|1068
*
5EL4|1|1G|C|1107
5EL4|1|1G|G|1108
5EL4|1|1G|C|1109
5EL4|1|1G|A|1110
5EL4|1|1G|A|1111
5EL4|1|1G|C|1112
5EL4|1|1G|C|1113
5EL4|1|1G|C|1114
*
5EL4|1|1G|G|1186
5EL4|1|1G|G|1187
5EL4|1|1G|A|1188
5EL4|1|1G|C|1189
5EL4|1|1G|G|1190
5EL4|1|1G|A|1191
5EL4|1|1G|C|1192
5EL4|1|1G|G|1193
5EL4|1|1G|U|1194
5EL4|1|1G|C|1195
5EL4|1|1G|U|1196
5EL4|1|1G|G|1197

Current chains

Chain 1G
16S ribosomal RNA

Nearby chains

Chain 1A
30S ribosomal protein S10
Chain 1L
Transfer RNA; tRNA
Chain 22
30S ribosomal protein S3
Chain 42
30S ribosomal protein S5
Chain 4L
mRNA
Chain 5A
30S ribosomal protein S14 type Z
Chain 82
30S ribosomal protein S9

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.7138 s