J3_5EL7_075

3D structure

PDB id

5EL7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

GAACCCG*UGGGGUGCCC*GGGAGC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5EL7|1|1G|G|1003
5EL7|1|1G|A|1004
5EL7|1|1G|A|1005
5EL7|1|1G|C|1006
5EL7|1|1G|C|1007
5EL7|1|1G|C|1008
5EL7|1|1G|G|1009
*
5EL7|1|1G|U|1020
5EL7|1|1G|G|1021
5EL7|1|1G|G|1022
5EL7|1|1G|G|1023
5EL7|1|1G|G|1024
5EL7|1|1G|U|1025
5EL7|1|1G|G|1026
5EL7|1|1G|C|1027
5EL7|1|1G|C|1028
5EL7|1|1G|C|1028|||A
*
5EL7|1|1G|G|1032|||B
5EL7|1|1G|G|1033
5EL7|1|1G|G|1034
5EL7|1|1G|A|1035
5EL7|1|1G|G|1036
5EL7|1|1G|C|1037

Current chains

Chain 1G

16S rRNA

Nearby chains