J3_5FCI_022

3D structure

PDB id

5FCI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the vacant uL3 W255C mutant 80S yeast ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GUGAACUA*UAG*CGAAC

Length

16 nucleotides

Bulged bases

5FCI|1|5|A|817, 5FCI|1|5|G|924

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5FCI|1|5|G|813
5FCI|1|5|U|814
5FCI|1|5|G|815
5FCI|1|5|A|816
5FCI|1|5|A|817
5FCI|1|5|C|818
5FCI|1|5|U|819
5FCI|1|5|A|820
*
5FCI|1|5|U|905
5FCI|1|5|A|906
5FCI|1|5|G|907
*
5FCI|1|5|C|923
5FCI|1|5|G|924
5FCI|1|5|A|925
5FCI|1|5|A|926
5FCI|1|5|C|927

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain l2

60S ribosomal protein L2-A

Chain m5

60S ribosomal protein L15-A

Chain o7

60S ribosomal protein L37-A

Chain o9

60S ribosomal protein L39