J3_5FCI_030

3D structure

PDB id

5FCI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the vacant uL3 W255C mutant 80S yeast ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

UAUC*GUUG*CACUAAUA

Length

16 nucleotides

Bulged bases

5FCI|1|5|A|2887

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5FCI|1|5|U|2886
5FCI|1|5|A|2887
5FCI|1|5|U|2888
5FCI|1|5|C|2889
*
5FCI|1|5|G|2914
5FCI|1|5|U|2915
5FCI|1|5|U|2916
5FCI|1|5|G|2917
*
5FCI|1|5|C|2929
5FCI|1|5|A|2930
5FCI|1|5|C|2931
5FCI|1|5|U|2932
5FCI|1|5|A|2933
5FCI|1|5|A|2934
5FCI|1|5|U|2935
5FCI|1|5|A|2936

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain l3

60S ribosomal protein L3

Chain m6

60S ribosomal protein L16-A

Chain n3

60S ribosomal protein L23-A