J3_5FCI_049

3D structure

PDB id

5FCI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the vacant uL3 W255C mutant 80S yeast ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GACGGUGGCC*GGAAUCCGCUAAGG*CAC

Length

27 nucleotides

Bulged bases

5FCI|1|1|G|1234, 5FCI|1|1|G|1236, 5FCI|1|1|C|1254

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5FCI|1|1|G|1230
5FCI|1|1|A|1231
5FCI|1|1|C|1232
5FCI|1|1|G|1233
5FCI|1|1|G|1234
5FCI|1|1|U|1235
5FCI|1|1|G|1236
5FCI|1|1|G|1237
5FCI|1|1|C|1238
5FCI|1|1|C|1239
*
5FCI|1|1|G|1249
5FCI|1|1|G|1250
5FCI|1|1|A|1251
5FCI|1|1|A|1252
5FCI|1|1|U|1253
5FCI|1|1|C|1254
5FCI|1|1|C|1255
5FCI|1|1|G|1256
5FCI|1|1|C|1257
5FCI|1|1|U|1258
5FCI|1|1|A|1259
5FCI|1|1|A|1260
5FCI|1|1|G|1261
5FCI|1|1|G|1262
*
5FCI|1|1|C|1277
5FCI|1|1|A|1278
5FCI|1|1|C|1279

Current chains

Chain 1

25S ribosomal RNA

Nearby chains