J3_5FCI_061

3D structure

PDB id

5FCI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the vacant uL3 W255C mutant 80S yeast ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

AGAUAAAAAAUCAAUG*CUCUUUG*CAU

Length

26 nucleotides

Bulged bases

5FCI|1|2|A|217, 5FCI|1|2|U|240

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5FCI|1|2|A|213
5FCI|1|2|G|214
5FCI|1|2|A|215
5FCI|1|2|U|216
5FCI|1|2|A|217
5FCI|1|2|A|218
5FCI|1|2|A|219
5FCI|1|2|A|220
5FCI|1|2|A|221
5FCI|1|2|A|222
5FCI|1|2|U|223
5FCI|1|2|C|224
5FCI|1|2|A|225
5FCI|1|2|A|226
5FCI|1|2|U|227
5FCI|1|2|G|228
*
5FCI|1|2|C|237
5FCI|1|2|U|238
5FCI|1|2|C|239
5FCI|1|2|U|240
5FCI|1|2|U|241
5FCI|1|2|U|242
5FCI|1|2|G|243
*
5FCI|1|2|C|250
5FCI|1|2|A|251
5FCI|1|2|U|252

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain C1

40S ribosomal protein S11-A,40S ribosomal protein S11-A (uS17)

Chain S4

40S ribosomal protein S4-A

Chain S6

40S ribosomal protein S6-A

Chain S8

40S ribosomal protein S8-A