J3_5FL8_007
3D structure
- PDB id
- 5FL8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- AUAGG*UCGUAGCGGUUC*GAUCGUCGAAU
- Length
- 28 nucleotides
- Bulged bases
- 5FL8|1|x|A|895, 5FL8|1|x|A|896
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5FL8|1|x|A|828
5FL8|1|x|U|829
5FL8|1|x|A|830
5FL8|1|x|G|831
5FL8|1|x|G|832
*
5FL8|1|x|U|862
5FL8|1|x|C|863
5FL8|1|x|G|864
5FL8|1|x|U|865
5FL8|1|x|A|866
5FL8|1|x|G|867
5FL8|1|x|C|868
5FL8|1|x|G|869
5FL8|1|x|G|870
5FL8|1|x|U|871
5FL8|1|x|U|872
5FL8|1|x|C|873
*
5FL8|1|x|G|887
5FL8|1|x|A|888
5FL8|1|x|U|889
5FL8|1|x|C|890
5FL8|1|x|G|891
5FL8|1|x|U|892
5FL8|1|x|C|893
5FL8|1|x|G|894
5FL8|1|x|A|895
5FL8|1|x|A|896
5FL8|1|x|U|897
Current chains
- Chain x
- 25S ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L2-A
- Chain B
- 60S ribosomal protein L3
- Chain R
- 60S ribosomal protein L19-A
- Chain g
- 60S ribosomal protein L34-A
- Chain j
- 60S ribosomal protein L37-A
- Chain p
- 60S ribosomal protein L43-A
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