J3_5H4P_004
3D structure
- PDB id
- 5H4P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.07 Å
Loop
- Sequence
- AUAG*CGUAGC*GUCGAAU
- Length
- 17 nucleotides
- Bulged bases
- 5H4P|1|1|A|896
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5H4P|1|1|A|828
5H4P|1|1|U|829
5H4P|1|1|A|830
5H4P|1|1|G|831
*
5H4P|1|1|C|863
5H4P|1|1|G|864
5H4P|1|1|U|865
5H4P|1|1|A|866
5H4P|1|1|G|867
5H4P|1|1|C|868
*
5H4P|1|1|G|891
5H4P|1|1|U|892
5H4P|1|1|C|893
5H4P|1|1|G|894
5H4P|1|1|A|895
5H4P|1|1|A|896
5H4P|1|1|U|897
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L2-A
- Chain R
- 60S ribosomal protein L19-A
- Chain g
- 60S ribosomal protein L34-A
- Chain j
- 60S ribosomal protein L37-A
- Chain p
- 60S ribosomal protein L43-A
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