J3_5H4P_009
3D structure
- PDB id
- 5H4P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.07 Å
Loop
- Sequence
- CA*UAACUGAAU*AGGAAG
- Length
- 17 nucleotides
- Bulged bases
- 5H4P|1|1|A|1642
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5H4P|1|1|C|1631
5H4P|1|1|A|1632
*
5H4P|1|1|U|1641
5H4P|1|1|A|1642
5H4P|1|1|A|1643
5H4P|1|1|C|1644
5H4P|1|1|U|1645
5H4P|1|1|G|1646
5H4P|1|1|A|1647
5H4P|1|1|A|1648
5H4P|1|1|U|1649
*
5H4P|1|1|A|1806
5H4P|1|1|G|1807
5H4P|1|1|G|1808
5H4P|1|1|A|1809
5H4P|1|1|A|1810
5H4P|1|1|G|1811
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L2-A
- Chain Z
- 60S ribosomal protein L27-A
- Chain g
- 60S ribosomal protein L34-A
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