J3_5H4P_020
3D structure
- PDB id
- 5H4P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.07 Å
Loop
- Sequence
- AUCA*UGAGGACUGCG*CAAGGAU
- Length
- 22 nucleotides
- Bulged bases
- 5H4P|1|1|A|607
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5H4P|1|1|A|501
5H4P|1|1|U|502
5H4P|1|1|C|503
5H4P|1|1|A|504
*
5H4P|1|1|U|587
5H4P|1|1|G|588
5H4P|1|1|A|589
5H4P|1|1|G|590
5H4P|1|1|G|591
5H4P|1|1|A|592
5H4P|1|1|C|593
5H4P|1|1|U|594
5H4P|1|1|G|595
5H4P|1|1|C|596
5H4P|1|1|G|597
*
5H4P|1|1|C|606
5H4P|1|1|A|607
5H4P|1|1|A|608
5H4P|1|1|G|609
5H4P|1|1|G|610
5H4P|1|1|A|611
5H4P|1|1|U|612
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain C
- 60S ribosomal protein L4-A
- Chain E
- 60S ribosomal protein L6-A
- Chain F
- 60S ribosomal protein L7-A
- Chain e
- 60S ribosomal protein L32
- Chain f
- 60S ribosomal protein L33-A
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