J3_5H5U_023

3D structure

PDB id

5H5U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanistic insights into the alternative translation termination by ArfA and RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

GAAGUU*GAAUGUGC*GAAC

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5H5U|1|h|G|1003
5H5U|1|h|A|1004
5H5U|1|h|A|1005
5H5U|1|h|G|1006
5H5U|1|h|U|1007
5H5U|1|h|U|1008
*
5H5U|1|h|G|1020
5H5U|1|h|A|1021
5H5U|1|h|A|1022
5H5U|1|h|U|1023
5H5U|1|h|G|1024
5H5U|1|h|U|1025
5H5U|1|h|G|1026
5H5U|1|h|C|1027
*
5H5U|1|h|G|1034
5H5U|1|h|A|1035
5H5U|1|h|A|1036
5H5U|1|h|C|1037

Current chains

Chain h

16S rRNA

Nearby chains

Chain u

30S ribosomal protein S14