3D structure

PDB id
5HAU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CCAUAG*CGC*GUCG
Length
13 nucleotides
Bulged bases
5HAU|1|1B|C|109
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5HAU|1|1B|C|11
5HAU|1|1B|C|12
5HAU|1|1B|A|13
5HAU|1|1B|U|14
5HAU|1|1B|A|15
5HAU|1|1B|G|16
*
5HAU|1|1B|C|68
5HAU|1|1B|G|69
5HAU|1|1B|C|70
*
5HAU|1|1B|G|107
5HAU|1|1B|U|108
5HAU|1|1B|C|109
5HAU|1|1B|G|110

Current chains

Chain 1B
5S Ribosomal RNA

Nearby chains

Chain 1A
Large subunit ribosomal RNA; LSU rRNA
Chain 1Q
50S ribosomal protein L18
Chain 1X
50S ribosomal protein L25
Chain 1Y
50S ribosomal protein L27

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1602 s
Application loaded.