J3_5IBB_034

3D structure

PDB id

5IBB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

2.96 Å

Loop

Sequence

GGAACC*GGGUGCC*GGAGCC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IBB|1|1G|G|1002
5IBB|1|1G|G|1003
5IBB|1|1G|A|1004
5IBB|1|1G|A|1005
5IBB|1|1G|C|1006
5IBB|1|1G|C|1007
*
5IBB|1|1G|G|1022
5IBB|1|1G|G|1023
5IBB|1|1G|G|1024
5IBB|1|1G|U|1025
5IBB|1|1G|G|1026
5IBB|1|1G|C|1027
5IBB|1|1G|C|1028
*
5IBB|1|1G|G|1033
5IBB|1|1G|G|1034
5IBB|1|1G|A|1035
5IBB|1|1G|G|1036
5IBB|1|1G|C|1037
5IBB|1|1G|C|1038

Current chains

Chain 1G

16S ribosomal RNA

Nearby chains