J3_5IMQ_005
3D structure
- PDB id
- 5IMQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosome bound to cofactor at 3.8 angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUUUAAUUC*GAAGAACCUUAC*GGCGAC
- Length
- 27 nucleotides
- Bulged bases
- 5IMQ|1|A|A|975, 5IMQ|1|A|G|976
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5IMQ|1|A|G|954
5IMQ|1|A|U|955
5IMQ|1|A|U|956
5IMQ|1|A|U|957
5IMQ|1|A|A|958
5IMQ|1|A|A|959
5IMQ|1|A|U|960
5IMQ|1|A|U|961
5IMQ|1|A|C|962
*
5IMQ|1|A|G|973
5IMQ|1|A|A|974
5IMQ|1|A|A|975
5IMQ|1|A|G|976
5IMQ|1|A|A|977
5IMQ|1|A|A|978
5IMQ|1|A|C|979
5IMQ|1|A|C|980
5IMQ|1|A|U|981
5IMQ|1|A|U|982
5IMQ|1|A|A|983
5IMQ|1|A|C|984
*
5IMQ|1|A|G|1221
5IMQ|1|A|G|1222
5IMQ|1|A|C|1223
5IMQ|1|A|G|1224
5IMQ|1|A|A|1225
5IMQ|1|A|C|1226
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain N
- 30S ribosomal protein S10
- Chain Q
- 30S ribosomal protein S13
- Chain R
- 30S ribosomal protein S14 type Z
- Chain W
- 30S ribosomal protein S19
Coloring options: