J3_5IMQ_006

3D structure

PDB id

5IMQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 3.8 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUUGACAUG*CACAG*CUUACG

Length

20 nucleotides

Bulged bases

5IMQ|1|A|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMQ|1|A|C|990
5IMQ|1|A|U|991
5IMQ|1|A|U|992
5IMQ|1|A|G|993
5IMQ|1|A|A|994
5IMQ|1|A|C|995
5IMQ|1|A|A|996
5IMQ|1|A|U|997
5IMQ|1|A|G|998
*
5IMQ|1|A|C|1043
5IMQ|1|A|A|1044
5IMQ|1|A|C|1045
5IMQ|1|A|A|1046
5IMQ|1|A|G|1047
*
5IMQ|1|A|C|1210
5IMQ|1|A|U|1211
5IMQ|1|A|U|1212
5IMQ|1|A|A|1213
5IMQ|1|A|C|1214
5IMQ|1|A|G|1215

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain R

30S ribosomal protein S14 type Z